Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH12P55289 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.66□□□□□ -0.06
CDH12P55289 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.66□□□□□ -0.06
CDH12P55289 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CDH12P55289 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 AC026748.1-201ENST00000624349 3251 ntBASIC14.66□□□□□ -0.06
CDH12P55289 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
CDH12P55289 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 AC013726.1-201ENST00000563747 2285 ntBASIC14.66□□□□□ -0.06
CDH12P55289 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CDH12P55289 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.66□□□□□ -0.06
CDH12P55289 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH12P55289 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CDH12P55289 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH12P55289 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.65□□□□□ -0.06
CDH12P55289 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 SPCS2P4-201ENST00000436160 681 ntBASIC14.65□□□□□ -0.06
CDH12P55289 SPDYE11-202ENST00000450699 704 ntBASIC14.65□□□□□ -0.06
CDH12P55289 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH12P55289 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 KRT8P48-201ENST00000515599 1220 ntBASIC14.65□□□□□ -0.06
CDH12P55289 RNA5SP410-201ENST00000516285 106 ntBASIC14.65□□□□□ -0.06
CDH12P55289 SPDYE9P-201ENST00000570642 692 ntBASIC14.65□□□□□ -0.06
CDH12P55289 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH12P55289 AC026120.1-201ENST00000611536 926 ntBASIC14.65□□□□□ -0.06
CDH12P55289 SPDYE10P-202ENST00000612005 668 ntBASIC14.65□□□□□ -0.06
CDH12P55289 SPDYE8P-202ENST00000612377 668 ntBASIC14.65□□□□□ -0.06
CDH12P55289 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.65□□□□□ -0.06
CDH12P55289 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.65□□□□□ -0.06
CDH12P55289 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CDH12P55289 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 LINC00528-201ENST00000600723 2160 ntBASIC14.65□□□□□ -0.06
CDH12P55289 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 AC023024.2-201ENST00000623561 1993 ntBASIC14.65□□□□□ -0.06
CDH12P55289 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.65□□□□□ -0.06
CDH12P55289 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CDH12P55289 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CDH12P55289 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
CDH12P55289 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CDH12P55289 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CDH12P55289 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CDH12P55289 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms