Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
CDH8P55286 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH8P55286 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.67■□□□□ 0.26
CDH8P55286 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 AC084364.1-201ENST00000551967 1556 ntBASIC16.67■□□□□ 0.26
CDH8P55286 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CDH8P55286 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH8P55286 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.67■□□□□ 0.26
CDH8P55286 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CDH8P55286 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CDH8P55286 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDH8P55286 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.66■□□□□ 0.26
CDH8P55286 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH8P55286 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH8P55286 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
CDH8P55286 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH8P55286 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.66■□□□□ 0.26
CDH8P55286 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 RRP7BP-205ENST00000566851 833 ntBASIC16.66■□□□□ 0.26
CDH8P55286 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CDH8P55286 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
CDH8P55286 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 AC025048.6-201ENST00000634326 1161 ntBASIC16.66■□□□□ 0.26
CDH8P55286 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CDH8P55286 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDH8P55286 AC073347.1-201ENST00000421633 2643 ntBASIC16.66■□□□□ 0.26
CDH8P55286 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 AC046158.3-201ENST00000624947 2558 ntBASIC16.65■□□□□ 0.26
CDH8P55286 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH8P55286 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.65■□□□□ 0.26
CDH8P55286 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH8P55286 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH8P55286 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.65■□□□□ 0.26
CDH8P55286 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
CDH8P55286 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.65■□□□□ 0.26
CDH8P55286 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.65■□□□□ 0.26
CDH8P55286 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDH8P55286 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CDH8P55286 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.64■□□□□ 0.25
CDH8P55286 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CDH8P55286 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDH8P55286 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms