Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.63□□□□□ -0.07
PSMD4P55036 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
PSMD4P55036 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
PSMD4P55036 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PSMD4P55036 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PSMD4P55036 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 HNRNPUP1-201ENST00000554987 333 ntBASIC14.63□□□□□ -0.07
PSMD4P55036 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.63□□□□□ -0.07
PSMD4P55036 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.63□□□□□ -0.07
PSMD4P55036 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.63□□□□□ -0.07
PSMD4P55036 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PSMD4P55036 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.63□□□□□ -0.07
PSMD4P55036 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 AC087481.3-201ENST00000602886 1894 ntBASIC14.63□□□□□ -0.07
PSMD4P55036 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 AC087499.5-201ENST00000452760 1342 ntBASIC14.63□□□□□ -0.07
PSMD4P55036 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PSMD4P55036 AC018892.3-201ENST00000623986 2499 ntBASIC14.63□□□□□ -0.07
PSMD4P55036 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.62□□□□□ -0.07
PSMD4P55036 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 TREML5P-201ENST00000421694 576 ntBASIC14.62□□□□□ -0.07
PSMD4P55036 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 AC241585.1-201ENST00000433527 519 ntBASIC14.62□□□□□ -0.07
PSMD4P55036 AC097493.3-201ENST00000509725 367 ntBASIC14.62□□□□□ -0.07
PSMD4P55036 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.62□□□□□ -0.07
PSMD4P55036 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.62□□□□□ -0.07
PSMD4P55036 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.62□□□□□ -0.07
PSMD4P55036 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PSMD4P55036 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.62□□□□□ -0.07
PSMD4P55036 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.61□□□□□ -0.07
PSMD4P55036 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.61□□□□□ -0.07
PSMD4P55036 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.61□□□□□ -0.07
PSMD4P55036 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.61□□□□□ -0.07
PSMD4P55036 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PSMD4P55036 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
PSMD4P55036 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms