Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.42■□□□□ 0.06
GTF2A1P52655 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GTF2A1P52655 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.42■□□□□ 0.06
GTF2A1P52655 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.42■□□□□ 0.06
GTF2A1P52655 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
GTF2A1P52655 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GTF2A1P52655 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
GTF2A1P52655 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC15.42■□□□□ 0.06
GTF2A1P52655 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
GTF2A1P52655 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GTF2A1P52655 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC15.42■□□□□ 0.06
GTF2A1P52655 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 OS9-218ENST00000551035 2246 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 ECEL1P3-201ENST00000427961 737 ntBASIC15.41■□□□□ 0.06
GTF2A1P52655 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.41■□□□□ 0.06
GTF2A1P52655 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.41■□□□□ 0.06
GTF2A1P52655 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 NAPSB-206ENST00000562112 1266 ntBASIC15.41■□□□□ 0.06
GTF2A1P52655 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GTF2A1P52655 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 AC102953.2-201ENST00000609755 3026 ntBASIC15.41■□□□□ 0.06
GTF2A1P52655 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
GTF2A1P52655 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 MEX3B-202ENST00000558133 4333 ntBASIC15.41■□□□□ 0.06
GTF2A1P52655 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GTF2A1P52655 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GTF2A1P52655 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GTF2A1P52655 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC15.41■□□□□ 0.06
GTF2A1P52655 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.4■□□□□ 0.06
GTF2A1P52655 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.4■□□□□ 0.06
GTF2A1P52655 AL365181.3-201ENST00000605886 3222 ntBASIC15.4■□□□□ 0.06
GTF2A1P52655 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.4■□□□□ 0.06
GTF2A1P52655 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
GTF2A1P52655 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GTF2A1P52655 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
GTF2A1P52655 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.4■□□□□ 0.06
GTF2A1P52655 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GTF2A1P52655 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.4■□□□□ 0.06
GTF2A1P52655 MIR648-201ENST00000385046 94 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms