Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.85□□□□□ -0.19
CCR9P51686 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CCR9P51686 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CCR9P51686 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CCR9P51686 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCR9P51686 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCR9P51686 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.84□□□□□ -0.19
CCR9P51686 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.84□□□□□ -0.19
CCR9P51686 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.84□□□□□ -0.19
CCR9P51686 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCR9P51686 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCR9P51686 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.84□□□□□ -0.19
CCR9P51686 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCR9P51686 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCR9P51686 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CCR9P51686 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCR9P51686 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCR9P51686 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.83□□□□□ -0.19
CCR9P51686 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCR9P51686 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCR9P51686 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCR9P51686 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCR9P51686 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCR9P51686 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.83□□□□□ -0.2
CCR9P51686 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.83□□□□□ -0.2
CCR9P51686 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 MIR346-201ENST00000362234 95 ntBASIC13.83□□□□□ -0.2
CCR9P51686 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCR9P51686 HLA-H-201ENST00000383620 1096 ntBASIC13.83□□□□□ -0.2
CCR9P51686 RPL5P21-201ENST00000404620 815 ntBASIC13.83□□□□□ -0.2
CCR9P51686 TFAMP1-201ENST00000412727 736 ntBASIC13.83□□□□□ -0.2
CCR9P51686 AL355306.1-201ENST00000415580 579 ntBASIC13.83□□□□□ -0.2
CCR9P51686 AL671277.1-201ENST00000429656 993 ntBASIC13.83□□□□□ -0.2
CCR9P51686 AC007967.2-201ENST00000432613 625 ntBASIC13.83□□□□□ -0.2
CCR9P51686 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCR9P51686 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.83□□□□□ -0.2
CCR9P51686 RN7SL589P-201ENST00000481268 310 ntBASIC13.83□□□□□ -0.2
CCR9P51686 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.83□□□□□ -0.2
CCR9P51686 AL135744.1-201ENST00000565098 629 ntBASIC13.83□□□□□ -0.2
CCR9P51686 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCR9P51686 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.83□□□□□ -0.2
CCR9P51686 AC097359.3-201ENST00000603982 1210 ntBASIC13.83□□□□□ -0.2
CCR9P51686 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.83□□□□□ -0.2
CCR9P51686 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.83□□□□□ -0.2
CCR9P51686 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.83□□□□□ -0.2
CCR9P51686 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.83□□□□□ -0.2
CCR9P51686 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CCR9P51686 AC023024.2-201ENST00000623561 1993 ntBASIC13.83□□□□□ -0.2
CCR9P51686 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCR9P51686 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCR9P51686 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms