Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.53■□□□□ 0.24
TUBP50607 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TUBP50607 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TUBP50607 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TUBP50607 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBP50607 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
TUBP50607 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.52■□□□□ 0.24
TUBP50607 AP002414.2-201ENST00000591780 3365 ntBASIC16.52■□□□□ 0.24
TUBP50607 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 AP006294.1-201ENST00000415407 339 ntBASIC16.52■□□□□ 0.24
TUBP50607 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBP50607 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBP50607 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBP50607 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.52■□□□□ 0.24
TUBP50607 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.24
TUBP50607 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.52■□□□□ 0.24
TUBP50607 AL158212.4-201ENST00000624062 1286 ntBASIC16.52■□□□□ 0.24
TUBP50607 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
TUBP50607 SNX18-202ENST00000343017 3140 ntBASIC16.52■□□□□ 0.24
TUBP50607 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TUBP50607 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
TUBP50607 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TUBP50607 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 AC138969.3-201ENST00000546612 1459 ntBASIC16.52■□□□□ 0.23
TUBP50607 AC138932.2-201ENST00000548268 1459 ntBASIC16.52■□□□□ 0.23
TUBP50607 AC126755.4-201ENST00000549796 1459 ntBASIC16.52■□□□□ 0.23
TUBP50607 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.52■□□□□ 0.23
TUBP50607 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
TUBP50607 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
TUBP50607 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TUBP50607 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TUBP50607 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBP50607 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBP50607 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 DGCR5-201ENST00000399539 862 ntBASIC16.51■□□□□ 0.23
TUBP50607 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.51■□□□□ 0.23
TUBP50607 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 AC123567.1-201ENST00000548294 1261 ntBASIC16.51■□□□□ 0.23
TUBP50607 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.51■□□□□ 0.23
TUBP50607 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TUBP50607 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBP50607 AC097359.3-201ENST00000603982 1210 ntBASIC16.51■□□□□ 0.23
TUBP50607 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.51■□□□□ 0.23
TUBP50607 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms