Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.82□□□□□ -0.04
CLK1P49759 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.82□□□□□ -0.04
CLK1P49759 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 AC026120.1-201ENST00000611536 926 ntBASIC14.82□□□□□ -0.04
CLK1P49759 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CLK1P49759 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 AC005622.1-201ENST00000636801 1703 ntBASIC14.82□□□□□ -0.04
CLK1P49759 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
CLK1P49759 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CLK1P49759 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CLK1P49759 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CLK1P49759 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.81□□□□□ -0.04
CLK1P49759 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 ADH5P3-201ENST00000433842 1137 ntBASIC14.81□□□□□ -0.04
CLK1P49759 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.81□□□□□ -0.04
CLK1P49759 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.81□□□□□ -0.04
CLK1P49759 YBX1P5-201ENST00000509441 847 ntBASIC14.81□□□□□ -0.04
CLK1P49759 PRYP6-201ENST00000514804 343 ntBASIC14.81□□□□□ -0.04
CLK1P49759 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 KRT8P23-201ENST00000560090 1207 ntBASIC14.81□□□□□ -0.04
CLK1P49759 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.81□□□□□ -0.04
CLK1P49759 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
CLK1P49759 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 AC073389.1-201ENST00000595595 795 ntBASIC14.81□□□□□ -0.04
CLK1P49759 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 AC008267.7-201ENST00000624570 1194 ntBASIC14.81□□□□□ -0.04
CLK1P49759 ELL2P1-201ENST00000413990 1906 ntBASIC14.81□□□□□ -0.04
CLK1P49759 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CLK1P49759 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CLK1P49759 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CLK1P49759 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
CLK1P49759 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CLK1P49759 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.8□□□□□ -0.04
CLK1P49759 GRK6P1-201ENST00000400595 1711 ntBASIC14.8□□□□□ -0.04
CLK1P49759 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CLK1P49759 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CLK1P49759 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CLK1P49759 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms