Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 RASAL1-204ENST00000546530 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC10.4□□□□□ -0.74
PCP4P48539 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
PCP4P48539 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC10.4□□□□□ -0.74
PCP4P48539 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 DDX11-223ENST00000542838 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PCP4P48539 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
PCP4P48539 GINS4-209ENST00000523277 3873 ntTSL 5 BASIC10.4□□□□□ -0.74
PCP4P48539 FAM110B-201ENST00000361488 3438 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.75
PCP4P48539 AC111182.1-201ENST00000588701 3419 ntBASIC10.4□□□□□ -0.75
PCP4P48539 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
PCP4P48539 ZNF23-201ENST00000357254 3186 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.75
PCP4P48539 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.75
PCP4P48539 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
PCP4P48539 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
PCP4P48539 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
PCP4P48539 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
PCP4P48539 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
PCP4P48539 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
PCP4P48539 AL356488.3-201ENST00000608574 2888 ntBASIC10.4□□□□□ -0.75
PCP4P48539 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.75
PCP4P48539 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 LOXHD1-210ENST00000536736 6848 ntAPPRIS P5 TSL 5 BASIC10.39□□□□□ -0.75
PCP4P48539 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 SH3RF2-201ENST00000359120 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 SLAMF7-205ENST00000444090 2393 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC10.39□□□□□ -0.75
PCP4P48539 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 ARHGAP25-202ENST00000409202 2945 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 GEMIN4-207ENST00000576778 4729 ntBASIC10.39□□□□□ -0.75
PCP4P48539 EIF3A-203ENST00000541549 4495 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
PCP4P48539 FGFR1-208ENST00000397108 2870 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 AC024075.2-201ENST00000598112 1473 ntBASIC10.39□□□□□ -0.75
PCP4P48539 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 ASB1-202ENST00000409297 878 ntTSL 5 BASIC10.39□□□□□ -0.75
PCP4P48539 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 AC003958.1-201ENST00000435883 421 ntBASIC10.39□□□□□ -0.75
PCP4P48539 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 SORL1-206ENST00000527934 3032 ntTSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 AC073862.5-201ENST00000624129 2027 ntBASIC10.39□□□□□ -0.75
PCP4P48539 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 KCNA10-201ENST00000369771 1959 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
PCP4P48539 SERPINA10-204ENST00000554723 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC10.39□□□□□ -0.75
PCP4P48539 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 AL353616.1-201ENST00000436315 2860 ntBASIC10.39□□□□□ -0.75
PCP4P48539 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
PCP4P48539 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC10.39□□□□□ -0.75
PCP4P48539 HPSE2-203ENST00000370552 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.38□□□□□ -0.75
PCP4P48539 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
PCP4P48539 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC10.38□□□□□ -0.75
PCP4P48539 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
PCP4P48539 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC10.38□□□□□ -0.75
PCP4P48539 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.38□□□□□ -0.75
PCP4P48539 BCL2L11-218ENST00000615946 5026 ntTSL 5 BASIC10.38□□□□□ -0.75
PCP4P48539 BCL2L11-220ENST00000620862 5044 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
PCP4P48539 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC10.38□□□□□ -0.75
PCP4P48539 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
PCP4P48539 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC10.38□□□□□ -0.75
PCP4P48539 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 TNFSF10-202ENST00000420541 1619 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 GPR82-201ENST00000302548 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
PCP4P48539 BRD9-204ENST00000483173 2120 ntTSL 2 BASIC10.38□□□□□ -0.75
PCP4P48539 SLFNL1-202ENST00000359345 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 ADGRE5-203ENST00000358600 2751 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PCP4P48539 NLRP1-201ENST00000262467 5131 ntTSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms