Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 HAUS4P1-201ENST00000406739 1145 ntBASIC12.97□□□□□ -0.33
SNCAP37840 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.97□□□□□ -0.33
SNCAP37840 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC12.97□□□□□ -0.33
SNCAP37840 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 AC012313.10-201ENST00000623509 926 ntBASIC12.97□□□□□ -0.33
SNCAP37840 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 BEND3P1-201ENST00000421591 1944 ntBASIC12.97□□□□□ -0.33
SNCAP37840 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 AC090616.6-203ENST00000579186 1945 ntBASIC12.97□□□□□ -0.33
SNCAP37840 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 AC009090.5-201ENST00000624886 2285 ntBASIC12.97□□□□□ -0.33
SNCAP37840 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 AJ011931.1-201ENST00000618749 2492 ntBASIC12.97□□□□□ -0.33
SNCAP37840 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.97□□□□□ -0.33
SNCAP37840 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.97□□□□□ -0.33
SNCAP37840 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
SNCAP37840 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.96□□□□□ -0.33
SNCAP37840 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SNCAP37840 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.96□□□□□ -0.33
SNCAP37840 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 CENPM-204ENST00000402420 688 ntTSL 5 BASIC12.96□□□□□ -0.33
SNCAP37840 AC018712.1-201ENST00000455767 687 ntBASIC12.96□□□□□ -0.33
SNCAP37840 AC092910.1-201ENST00000482027 1129 ntBASIC12.96□□□□□ -0.33
SNCAP37840 KRT18P34-201ENST00000488218 1270 ntBASIC12.96□□□□□ -0.33
SNCAP37840 AC108751.1-201ENST00000490852 363 ntBASIC12.96□□□□□ -0.33
SNCAP37840 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.96□□□□□ -0.33
SNCAP37840 OR7E47P-204ENST00000575924 449 ntBASIC12.96□□□□□ -0.33
SNCAP37840 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.96□□□□□ -0.33
SNCAP37840 AL365330.1-201ENST00000607459 531 ntBASIC12.96□□□□□ -0.33
SNCAP37840 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.96□□□□□ -0.33
SNCAP37840 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
SNCAP37840 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.96□□□□□ -0.33
SNCAP37840 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SNCAP37840 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SNCAP37840 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNCAP37840 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SNCAP37840 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.34
SNCAP37840 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNCAP37840 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNCAP37840 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNCAP37840 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.96□□□□□ -0.34
SNCAP37840 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.96□□□□□ -0.34
SNCAP37840 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.96□□□□□ -0.34
SNCAP37840 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SNCAP37840 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.95□□□□□ -0.34
SNCAP37840 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.95□□□□□ -0.34
SNCAP37840 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SNCAP37840 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms