Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CTNNA1P35221 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.6■□□□□ 0.25
CTNNA1P35221 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.6■□□□□ 0.25
CTNNA1P35221 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.6■□□□□ 0.25
CTNNA1P35221 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.6■□□□□ 0.25
CTNNA1P35221 AC097359.3-201ENST00000603982 1210 ntBASIC16.6■□□□□ 0.25
CTNNA1P35221 AC026979.3-201ENST00000607315 403 ntBASIC16.6■□□□□ 0.25
CTNNA1P35221 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
CTNNA1P35221 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.6■□□□□ 0.25
CTNNA1P35221 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CTNNA1P35221 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 AC139749.1-202ENST00000617529 3139 ntBASIC16.59■□□□□ 0.25
CTNNA1P35221 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 YBX2P1-201ENST00000394192 760 ntBASIC16.59■□□□□ 0.25
CTNNA1P35221 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CTNNA1P35221 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 IGHV3-62-201ENST00000520057 340 ntBASIC16.59■□□□□ 0.25
CTNNA1P35221 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CTNNA1P35221 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.59■□□□□ 0.25
CTNNA1P35221 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.59■□□□□ 0.25
CTNNA1P35221 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 AP3S2-216ENST00000617003 1561 ntBASIC16.59■□□□□ 0.25
CTNNA1P35221 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CTNNA1P35221 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CTNNA1P35221 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
CTNNA1P35221 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTNNA1P35221 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CTNNA1P35221 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.58■□□□□ 0.25
CTNNA1P35221 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTNNA1P35221 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CTNNA1P35221 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
CTNNA1P35221 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CTNNA1P35221 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTNNA1P35221 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.58■□□□□ 0.24
CTNNA1P35221 ACTG1P14-201ENST00000446382 1122 ntBASIC16.58■□□□□ 0.24
CTNNA1P35221 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CTNNA1P35221 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CTNNA1P35221 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.58■□□□□ 0.24
CTNNA1P35221 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.58■□□□□ 0.24
CTNNA1P35221 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CTNNA1P35221 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.58■□□□□ 0.24
CTNNA1P35221 AC040169.1-201ENST00000565382 521 ntBASIC16.58■□□□□ 0.24
CTNNA1P35221 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.58■□□□□ 0.24
CTNNA1P35221 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.58■□□□□ 0.24
CTNNA1P35221 AL121894.2-201ENST00000602977 491 ntBASIC16.58■□□□□ 0.24
CTNNA1P35221 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms