Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 AL033527.5-202ENST00000641632 1098 ntBASIC13.17□□□□□ -0.3
LMO1P25800 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.17□□□□□ -0.3
LMO1P25800 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO1P25800 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO1P25800 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.17□□□□□ -0.3
LMO1P25800 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LMO1P25800 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO1P25800 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO1P25800 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
LMO1P25800 AC005912.2-201ENST00000619492 2400 ntBASIC13.17□□□□□ -0.3
LMO1P25800 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
LMO1P25800 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
LMO1P25800 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO1P25800 TSEN15P1-201ENST00000423257 515 ntBASIC13.16□□□□□ -0.3
LMO1P25800 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO1P25800 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO1P25800 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO1P25800 AC025678.2-201ENST00000562061 970 ntBASIC13.16□□□□□ -0.3
LMO1P25800 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.16□□□□□ -0.3
LMO1P25800 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 FO538757.1-201ENST00000623083 1397 ntBASIC13.16□□□□□ -0.3
LMO1P25800 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
LMO1P25800 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
LMO1P25800 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.16□□□□□ -0.3
LMO1P25800 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO1P25800 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
LMO1P25800 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
LMO1P25800 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.15□□□□□ -0.3
LMO1P25800 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
LMO1P25800 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO1P25800 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.15□□□□□ -0.3
LMO1P25800 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LMO1P25800 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms