Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.44■□□□□ 0.22
MMP8P22894 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
MMP8P22894 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
MMP8P22894 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.43■□□□□ 0.22
MMP8P22894 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
MMP8P22894 SPDYE18-201ENST00000510091 1050 ntBASIC16.43■□□□□ 0.22
MMP8P22894 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
MMP8P22894 AC005498.2-205ENST00000593218 784 ntBASIC16.43■□□□□ 0.22
MMP8P22894 AC025181.2-201ENST00000606994 802 ntBASIC16.43■□□□□ 0.22
MMP8P22894 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP8P22894 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
MMP8P22894 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MMP8P22894 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
MMP8P22894 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.43■□□□□ 0.22
MMP8P22894 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.43■□□□□ 0.22
MMP8P22894 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MMP8P22894 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 AGAP7P-201ENST00000582299 2062 ntBASIC16.42■□□□□ 0.22
MMP8P22894 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 AGAP14-201ENST00000624701 2060 ntBASIC16.42■□□□□ 0.22
MMP8P22894 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MMP8P22894 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP8P22894 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP8P22894 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.42■□□□□ 0.22
MMP8P22894 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 TSPY26P-202ENST00000565928 3884 ntBASIC16.42■□□□□ 0.22
MMP8P22894 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.42■□□□□ 0.22
MMP8P22894 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP8P22894 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MMP8P22894 MRPS18AP1-201ENST00000414458 589 ntBASIC16.42■□□□□ 0.22
MMP8P22894 FAM8A3P-201ENST00000427218 844 ntBASIC16.42■□□□□ 0.22
MMP8P22894 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP8P22894 AL391069.4-201ENST00000609583 481 ntBASIC16.42■□□□□ 0.22
MMP8P22894 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.42■□□□□ 0.22
MMP8P22894 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.42■□□□□ 0.22
MMP8P22894 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
MMP8P22894 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.42■□□□□ 0.22
MMP8P22894 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MMP8P22894 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MMP8P22894 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.41■□□□□ 0.22
MMP8P22894 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms