Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.94□□□□□ -0.34
CCL3L1P16619 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.94□□□□□ -0.34
CCL3L1P16619 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CCL3L1P16619 SRD5A3P1-201ENST00000603021 949 ntBASIC12.94□□□□□ -0.34
CCL3L1P16619 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.94□□□□□ -0.34
CCL3L1P16619 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL3L1P16619 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL3L1P16619 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CCL3L1P16619 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CCL3L1P16619 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL3L1P16619 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 AC087481.3-201ENST00000602886 1894 ntBASIC12.93□□□□□ -0.34
CCL3L1P16619 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 GNAQP1-201ENST00000444815 1067 ntBASIC12.93□□□□□ -0.34
CCL3L1P16619 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 SERBP1P5-201ENST00000510079 1181 ntBASIC12.93□□□□□ -0.34
CCL3L1P16619 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.93□□□□□ -0.34
CCL3L1P16619 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 SSR4P1-203ENST00000599569 2260 ntBASIC12.93□□□□□ -0.34
CCL3L1P16619 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
CCL3L1P16619 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.93□□□□□ -0.34
CCL3L1P16619 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CCL3L1P16619 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
CCL3L1P16619 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CCL3L1P16619 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CCL3L1P16619 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCL3L1P16619 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CCL3L1P16619 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.92□□□□□ -0.34
CCL3L1P16619 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 SPDYE19P-201ENST00000338590 713 ntBASIC12.92□□□□□ -0.34
CCL3L1P16619 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CCL3L1P16619 MIR661-201ENST00000384842 89 ntBASIC12.92□□□□□ -0.34
CCL3L1P16619 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CCL3L1P16619 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CCL3L1P16619 AC236430.1-201ENST00000402231 743 ntBASIC12.92□□□□□ -0.34
CCL3L1P16619 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms