Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 KRT18P58-201ENST00000527480 1120 ntBASIC15.25■□□□□ 0.03
LINGO3P0C6S8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AC018845.2-201ENST00000568326 409 ntBASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AC112693.3-201ENST00000624819 1983 ntBASIC15.25■□□□□ 0.03
LINGO3P0C6S8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.24■□□□□ 0.03
LINGO3P0C6S8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 AC023141.13-201ENST00000604991 943 ntBASIC15.24■□□□□ 0.03
LINGO3P0C6S8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 AC007064.4-201ENST00000637740 555 ntBASIC15.24■□□□□ 0.03
LINGO3P0C6S8 AL645728.2-201ENST00000641974 660 ntBASIC15.24■□□□□ 0.03
LINGO3P0C6S8 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINGO3P0C6S8 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AC092127.1-201ENST00000567093 3455 ntBASIC15.23■□□□□ 0.03
LINGO3P0C6S8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AL031432.2-201ENST00000566714 459 ntBASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AL928711.1-201ENST00000570165 459 ntBASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AC004877.2-201ENST00000623941 599 ntBASIC15.23■□□□□ 0.03
LINGO3P0C6S8 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINGO3P0C6S8 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms