Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CSF1P09603 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.65□□□□□ -0.22
CSF1P09603 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CSF1P09603 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CSF1P09603 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
CSF1P09603 WASH6P-202ENST00000359512 1437 ntBASIC13.64□□□□□ -0.23
CSF1P09603 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.64□□□□□ -0.23
CSF1P09603 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.64□□□□□ -0.23
CSF1P09603 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CSF1P09603 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 CRYGEP-201ENST00000412192 528 ntBASIC13.64□□□□□ -0.23
CSF1P09603 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.64□□□□□ -0.23
CSF1P09603 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.64□□□□□ -0.23
CSF1P09603 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.64□□□□□ -0.23
CSF1P09603 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CSF1P09603 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.64□□□□□ -0.23
CSF1P09603 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.64□□□□□ -0.23
CSF1P09603 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CSF1P09603 AJ011931.1-201ENST00000618749 2492 ntBASIC13.64□□□□□ -0.23
CSF1P09603 KRT18P28-201ENST00000453838 1332 ntBASIC13.64□□□□□ -0.23
CSF1P09603 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CSF1P09603 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.63□□□□□ -0.23
CSF1P09603 AC148477.4-201ENST00000613430 1793 ntBASIC13.63□□□□□ -0.23
CSF1P09603 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSF1P09603 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.63□□□□□ -0.23
CSF1P09603 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.63□□□□□ -0.23
CSF1P09603 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CSF1P09603 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.63□□□□□ -0.23
CSF1P09603 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSF1P09603 METTL21AP1-201ENST00000438852 635 ntBASIC13.63□□□□□ -0.23
CSF1P09603 AP006288.1-201ENST00000446065 395 ntBASIC13.63□□□□□ -0.23
CSF1P09603 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.63□□□□□ -0.23
CSF1P09603 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.63□□□□□ -0.23
CSF1P09603 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.63□□□□□ -0.23
CSF1P09603 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CSF1P09603 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
CSF1P09603 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.63□□□□□ -0.23
CSF1P09603 LINC02084-201ENST00000606069 1096 ntBASIC13.63□□□□□ -0.23
CSF1P09603 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.63□□□□□ -0.23
CSF1P09603 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CSF1P09603 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CSF1P09603 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
CSF1P09603 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms