Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 SPTLC1P1-201ENST00000447199 261 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC023310.3-201ENST00000557027 670 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC100756.1-201ENST00000562736 682 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC138749.3-201ENST00000567691 622 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC116165.1-201ENST00000611806 668 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC009118.2-201ENST00000613275 655 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC008761.3-201ENST00000624803 892 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 LINC00554-201ENST00000564841 3011 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AC068587.6-202ENST00000641839 5619 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AL162727.3-201ENST00000635661 2787 ntBASIC12.11□□□□□ -0.47
TRBV12-3P01733 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV12-3P01733 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV12-3P01733 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 MEIS3P1-201ENST00000495167 958 ntBASIC12.1□□□□□ -0.47
TRBV12-3P01733 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 TPRX2P-201ENST00000535362 881 ntBASIC12.1□□□□□ -0.47
TRBV12-3P01733 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 AL158212.4-201ENST00000624062 1286 ntBASIC12.1□□□□□ -0.47
TRBV12-3P01733 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV12-3P01733 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
TRBV12-3P01733 AC087481.3-201ENST00000602886 1894 ntBASIC12.1□□□□□ -0.47
TRBV12-3P01733 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms