Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX2-2O95096 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-2O95096 AL589987.1-201ENST00000453380 819 ntBASIC14.42□□□□□ -0.1
NKX2-2O95096 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-2O95096 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX2-2O95096 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.42□□□□□ -0.1
NKX2-2O95096 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-2O95096 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-2O95096 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 AC025181.2-201ENST00000606994 802 ntBASIC14.42□□□□□ -0.1
NKX2-2O95096 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-2O95096 AL158212.4-201ENST00000624062 1286 ntBASIC14.42□□□□□ -0.1
NKX2-2O95096 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-2O95096 AL645728.2-202ENST00000641679 227 ntBASIC14.42□□□□□ -0.1
NKX2-2O95096 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NKX2-2O95096 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-2O95096 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-2O95096 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NKX2-2O95096 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.42□□□□□ -0.1
NKX2-2O95096 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.42□□□□□ -0.1
NKX2-2O95096 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX2-2O95096 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-2O95096 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NKX2-2O95096 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NKX2-2O95096 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.41□□□□□ -0.1
NKX2-2O95096 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.41□□□□□ -0.1
NKX2-2O95096 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 RNA5SP421-201ENST00000516864 134 ntBASIC14.41□□□□□ -0.1
NKX2-2O95096 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-2O95096 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NKX2-2O95096 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 LINC00554-201ENST00000564841 3011 ntBASIC14.41□□□□□ -0.1
NKX2-2O95096 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.41□□□□□ -0.1
NKX2-2O95096 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-2O95096 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.41□□□□□ -0.1
NKX2-2O95096 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NKX2-2O95096 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
NKX2-2O95096 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NKX2-2O95096 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-2O95096 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NKX2-2O95096 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX2-2O95096 GHSR-202ENST00000427970 912 ntBASIC14.4□□□□□ -0.1
NKX2-2O95096 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.4□□□□□ -0.1
NKX2-2O95096 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.4□□□□□ -0.1
NKX2-2O95096 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-2O95096 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 AC104794.3-201ENST00000566840 1248 ntBASIC14.4□□□□□ -0.1
NKX2-2O95096 AC027796.2-201ENST00000575326 344 ntBASIC14.4□□□□□ -0.1
NKX2-2O95096 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-2O95096 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-2O95096 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NKX2-2O95096 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.4□□□□□ -0.1
NKX2-2O95096 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.4□□□□□ -0.1
NKX2-2O95096 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms