Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.4■□□□□ 0.22
TNRC18O15417 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TNRC18O15417 AC092896.1-201ENST00000465850 380 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 RN7SL582P-201ENST00000491078 279 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 AC006116.2-201ENST00000589958 988 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TNRC18O15417 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 AL138725.1-201ENST00000407347 1314 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC16.4■□□□□ 0.22
TNRC18O15417 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.4■□□□□ 0.22
TNRC18O15417 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNRC18O15417 AC018695.7-201ENST00000624587 2492 ntBASIC16.4■□□□□ 0.22
TNRC18O15417 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TNRC18O15417 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TNRC18O15417 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 AC092570.1-201ENST00000414446 469 ntBASIC16.39■□□□□ 0.21
TNRC18O15417 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC16.39■□□□□ 0.21
TNRC18O15417 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TNRC18O15417 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TNRC18O15417 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.39■□□□□ 0.21
TNRC18O15417 AL138688.1-201ENST00000624851 1594 ntBASIC16.39■□□□□ 0.21
TNRC18O15417 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC16.39■□□□□ 0.21
TNRC18O15417 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC16.39■□□□□ 0.21
TNRC18O15417 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC16.39■□□□□ 0.21
TNRC18O15417 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TNRC18O15417 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
TNRC18O15417 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNRC18O15417 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.39■□□□□ 0.21
TNRC18O15417 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.39■□□□□ 0.21
TNRC18O15417 AC090164.3-201ENST00000610780 2143 ntBASIC16.39■□□□□ 0.21
TNRC18O15417 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC16.38■□□□□ 0.21
TNRC18O15417 URB1-AS1-201ENST00000534991 831 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 HERC2P11-201ENST00000562845 725 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 AC100756.2-201ENST00000569537 736 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 HNRNPA1P16-201ENST00000575692 955 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TNRC18O15417 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TNRC18O15417 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.38■□□□□ 0.21
TNRC18O15417 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.38■□□□□ 0.21
TNRC18O15417 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.38■□□□□ 0.21
TNRC18O15417 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.38■□□□□ 0.21
TNRC18O15417 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 HLA-DMA-202ENST00000395303 1007 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 MESTP3-201ENST00000503460 968 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.38■□□□□ 0.21
TNRC18O15417 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC16.38■□□□□ 0.21
TNRC18O15417 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC16.38■□□□□ 0.21
TNRC18O15417 RN7SL602P-201ENST00000578326 324 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 RN7SL718P-201ENST00000581254 303 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 UBALD1-205ENST00000590891 2641 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TNRC18O15417 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
TNRC18O15417 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.38■□□□□ 0.21
TNRC18O15417 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC16.38■□□□□ 0.21
TNRC18O15417 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNRC18O15417 AC012441.2-201ENST00000444843 739 ntBASIC16.38■□□□□ 0.21
TNRC18O15417 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.38■□□□□ 0.21
TNRC18O15417 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.38■□□□□ 0.21
TNRC18O15417 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.37■□□□□ 0.21
TNRC18O15417 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNRC18O15417 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNRC18O15417 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNRC18O15417 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNRC18O15417 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.37■□□□□ 0.21
TNRC18O15417 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNRC18O15417 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.37■□□□□ 0.21
TNRC18O15417 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNRC18O15417 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.37■□□□□ 0.21
TNRC18O15417 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms