Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LOC102724428A0A0B4J2F2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.61■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC084364.1-201ENST00000551967 1556 ntBASIC19.61■□□□□ 0.73
LOC102724428A0A0B4J2F2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC19.61■□□□□ 0.73
LOC102724428A0A0B4J2F2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LOC102724428A0A0B4J2F2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC092978.1-202ENST00000637590 1327 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 PRKXP1-201ENST00000561423 1122 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC013355.1-201ENST00000562625 723 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 SAMD11P1-201ENST00000571429 661 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 BNIP3P13-201ENST00000599968 566 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AF254983.2-201ENST00000612331 135 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC138466.3-201ENST00000619983 221 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 AL603764.1-201ENST00000636452 321 ntBASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.6■□□□□ 0.73
LOC102724428A0A0B4J2F2 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 CLUHP2-201ENST00000426660 1303 ntBASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 AC011742.3-201ENST00000439053 820 ntBASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 EEF1DP6-201ENST00000449232 372 ntBASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 RNMTL1P1-201ENST00000454103 560 ntBASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 EID1-202ENST00000560490 584 ntTSL 3 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.59■□□□□ 0.73
LOC102724428A0A0B4J2F2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LOC102724428A0A0B4J2F2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
LOC102724428A0A0B4J2F2 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LOC102724428A0A0B4J2F2 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.58■□□□□ 0.73
LOC102724428A0A0B4J2F2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LOC102724428A0A0B4J2F2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LOC102724428A0A0B4J2F2 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 AC004466.1-201ENST00000599515 1080 ntBASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 AL645728.2-202ENST00000641679 227 ntBASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.58■□□□□ 0.72
LOC102724428A0A0B4J2F2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms