Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 PPT1-215ENST00000641471 2368 ntBASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AL512356.2-201ENST00000546955 174 ntBASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AC105021.1-202ENST00000570572 669 ntBASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
HLA-DRB4X5D2U9 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 EEF1DP4-201ENST00000446006 880 ntBASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 LINC00628-201ENST00000628516 1289 ntBASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC11.87□□□□□ -0.51
HLA-DRB4X5D2U9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms