Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 BRI3BPP1-201ENST00000594224 787 ntBASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 BNIP3P1-202ENST00000550043 1585 ntBASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSX2IPQ9Y2D8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PHKG1P2-201ENST00000457537 863 ntBASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 SLC25A47P1-201ENST00000531577 414 ntBASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 AL022328.1-201ENST00000610050 478 ntBASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSX2IPQ9Y2D8 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 HAUS4P1-201ENST00000406739 1145 ntBASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 AC134915.1-201ENST00000426461 574 ntBASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 USP32P1-208ENST00000506594 1164 ntBASIC16.87■□□□□ 0.29
SSX2IPQ9Y2D8 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms