Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHA4Q9UN74 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 AL391825.1-201ENST00000457671 1364 ntBASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TERF1P3-201ENST00000505638 1227 ntBASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
PCDHA4Q9UN74 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 KRT8P44-201ENST00000441609 1350 ntBASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.83■□□□□ 0.45
PCDHA4Q9UN74 HYMAI-201ENST00000635591 3347 ntBASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 PIN1P1-201ENST00000412108 996 ntBASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 AL353779.1-201ENST00000434793 351 ntBASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 API5-211ENST00000534695 560 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 MIR8072-201ENST00000614241 80 ntBASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 AC104640.1-201ENST00000562617 2109 ntBASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
PCDHA4Q9UN74 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PCDHA4Q9UN74 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms