Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AC007326.2-201ENST00000624224 7579 ntBASIC13.63□□□□□ -0.23
TREM2Q9NZC2 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AC004890.2-204ENST00000481968 304 ntBASIC13.63□□□□□ -0.23
TREM2Q9NZC2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AL079307.3-201ENST00000556114 283 ntBASIC13.63□□□□□ -0.23
TREM2Q9NZC2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AC026979.3-201ENST00000607315 403 ntBASIC13.63□□□□□ -0.23
TREM2Q9NZC2 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TREM2Q9NZC2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 AC011477.6-201ENST00000604980 1927 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 FAM207CP-201ENST00000443486 507 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 AL139010.1-201ENST00000454878 894 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TEX28P1-201ENST00000613479 1221 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TEX28P2-201ENST00000617764 1221 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TREM2Q9NZC2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms