Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SBF1P1-201ENST00000444527 5631 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 AC005089.1-201ENST00000619486 2241 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 HLA-A-201ENST00000376802 1334 ntBASIC10.84□□□□□ -0.67
CDC42SE2Q9NRR3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.67
CDC42SE2Q9NRR3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC10.83□□□□□ -0.67
CDC42SE2Q9NRR3 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC026748.1-201ENST00000624349 3251 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 HLA-H-201ENST00000383620 1096 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 RPL5P21-201ENST00000404620 815 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 HNRNPA1P28-201ENST00000424481 961 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC097359.3-201ENST00000603982 1210 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AL513190.1-201ENST00000621254 727 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC007326.2-201ENST00000624224 7579 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AC007686.3-201ENST00000619017 3487 ntBASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CDC42SE2Q9NRR3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE2Q9NRR3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms