Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC004987.2-201ENST00000395959 1148 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CRYGEP-201ENST00000412192 528 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC098859.1-201ENST00000502915 1238 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 UNC93B6-202ENST00000528242 690 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC104072.1-201ENST00000568817 668 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MIR4760-201ENST00000585040 80 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC073389.1-201ENST00000595595 795 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC025165.5-201ENST00000602802 578 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC097359.3-201ENST00000603982 1210 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC007423.1-201ENST00000605009 627 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AL158050.2-201ENST00000605336 568 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC020910.4-201ENST00000612269 540 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC069503.1-202ENST00000616576 642 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AC041040.2-201ENST00000622926 2899 ntBASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
KRTAP3-1Q9BYR8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
KRTAP3-1Q9BYR8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
KRTAP3-1Q9BYR8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC8.02□□□□□ -1.13
KRTAP3-1Q9BYR8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC8.02□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms