Protein–RNA interactions for Protein: Q9BV40

VAMP8, Vesicle-associated membrane protein 8, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8Q9BV40 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 NIFKP9-201ENST00000419265 221 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 PHB2-213ENST00000546111 858 ntTSL 2 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 SOX15-203ENST00000570788 1093 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 AC130371.2-201ENST00000619443 611 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ABBA01031674.1-201ENST00000635145 728 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 AL365181.3-201ENST00000605886 3222 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 FSCN1P1-201ENST00000568912 1481 ntBASIC11.44□□□□□ -0.58
VAMP8Q9BV40 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
VAMP8Q9BV40 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AC010460.3-201ENST00000511359 1579 ntBASIC11.43□□□□□ -0.58
VAMP8Q9BV40 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AL356441.2-201ENST00000443009 864 ntBASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 UNC93B4-201ENST00000505679 747 ntBASIC11.43□□□□□ -0.58
VAMP8Q9BV40 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 WWOX-216ENST00000569818 525 ntBASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AC026271.3-201ENST00000571884 352 ntBASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
VAMP8Q9BV40 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms