Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
CHRDL1Q9BU40 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CD82-202ENST00000342935 967 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 HTR5BP-201ENST00000430851 1154 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 SPCS2P4-201ENST00000436160 681 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC245100.5-201ENST00000452108 331 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 TIMM8BP1-201ENST00000452384 211 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC079140.1-201ENST00000508039 487 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AC026120.1-201ENST00000611536 926 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 ST20-AS1-201ENST00000560255 4223 ntBASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CHRDL1Q9BU40 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.53□□□□□ -0.4
CHRDL1Q9BU40 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms