Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AC105233.2-201ENST00000523697 349 ntBASIC15.13■□□□□ 0.01
VPS33AQ96AX1 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AF228730.5-201ENST00000530288 346 ntBASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 PDPK2P-202ENST00000562415 1191 ntBASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AL513190.1-201ENST00000621254 727 ntBASIC15.13■□□□□ 0.01
VPS33AQ96AX1 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 AC007292.2-201ENST00000593524 1812 ntBASIC15.13■□□□□ 0.01
VPS33AQ96AX1 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.13■□□□□ 0.01
VPS33AQ96AX1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 AC145285.3-201ENST00000564603 959 ntBASIC15.12■□□□□ 0.01
VPS33AQ96AX1 RARRES2P8-201ENST00000566335 367 ntBASIC15.12■□□□□ 0.01
VPS33AQ96AX1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
VPS33AQ96AX1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VPS33AQ96AX1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms