Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 AL132655.2-201ENST00000596276 594 ntBASIC17.68■□□□□ 0.42
TNFRSF25Q93038 AL049840.4-201ENST00000602422 811 ntBASIC17.68■□□□□ 0.42
TNFRSF25Q93038 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.68■□□□□ 0.42
TNFRSF25Q93038 REXO1L4P-201ENST00000605109 1937 ntBASIC17.68■□□□□ 0.42
TNFRSF25Q93038 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TNFRSF25Q93038 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 LINC00528-201ENST00000600723 2160 ntBASIC17.67■□□□□ 0.42
TNFRSF25Q93038 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 MIR4745-201ENST00000577608 62 ntBASIC17.67■□□□□ 0.42
TNFRSF25Q93038 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TNFRSF25Q93038 DBET-201ENST00000630918 3363 ntBASIC17.66■□□□□ 0.42
TNFRSF25Q93038 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 VDAC1P7-201ENST00000462417 847 ntBASIC17.66■□□□□ 0.42
TNFRSF25Q93038 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TNFRSF25Q93038 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms