Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
AP3S1Q92572 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.87□□□□□ -0.19
AP3S1Q92572 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
AP3S1Q92572 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.87□□□□□ -0.19
AP3S1Q92572 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 GGTLC5P-201ENST00000617623 998 ntBASIC13.87□□□□□ -0.19
AP3S1Q92572 AC004706.3-202ENST00000621574 984 ntBASIC13.87□□□□□ -0.19
AP3S1Q92572 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 AC092135.3-201ENST00000624151 1846 ntBASIC13.87□□□□□ -0.19
AP3S1Q92572 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.87□□□□□ -0.19
AP3S1Q92572 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
AP3S1Q92572 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
AP3S1Q92572 AC079781.5-202ENST00000641784 3743 ntBASIC13.87□□□□□ -0.19
AP3S1Q92572 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
AP3S1Q92572 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 AL928921.2-201ENST00000641325 2442 ntBASIC13.86□□□□□ -0.19
AP3S1Q92572 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 MBLAC2-202ENST00000514906 1936 ntBASIC13.86□□□□□ -0.19
AP3S1Q92572 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 REXO1L2P-201ENST00000425429 2069 ntBASIC13.86□□□□□ -0.19
AP3S1Q92572 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 DRAXINP1-201ENST00000437611 948 ntBASIC13.86□□□□□ -0.19
AP3S1Q92572 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.86□□□□□ -0.19
AP3S1Q92572 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
AP3S1Q92572 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
AP3S1Q92572 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
AP3S1Q92572 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
AP3S1Q92572 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
AP3S1Q92572 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms