Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAF3IP1Q8TDR0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAF3IP1Q8TDR0 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAF3IP1Q8TDR0 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.39■□□□□ 0.22
TRAF3IP1Q8TDR0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAF3IP1Q8TDR0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 KRT18P13-201ENST00000400056 1290 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AC004967.1-201ENST00000453589 447 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 MIR4453-201ENST00000584019 89 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AL596442.2-201ENST00000610240 980 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AC134684.3-201ENST00000641758 218 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AC023157.3-201ENST00000619086 2088 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 AC009090.5-201ENST00000624886 2285 ntBASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAF3IP1Q8TDR0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 FO393414.2-201ENST00000405153 598 ntBASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 AP006288.1-201ENST00000446065 395 ntBASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAF3IP1Q8TDR0 AP001059.3-201ENST00000619053 235 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms