Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AL589987.1-201ENST00000453380 819 ntBASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 SPDYE18-201ENST00000510091 1050 ntBASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AC025181.2-201ENST00000606994 802 ntBASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AL391069.4-201ENST00000609583 481 ntBASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 AL390754.1-201ENST00000619088 582 ntBASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.53□□□□□ -0.24
RSPO1Q2MKA7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO1Q2MKA7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO1Q2MKA7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.52□□□□□ -0.24
RSPO1Q2MKA7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
RSPO1Q2MKA7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.52□□□□□ -0.24
RSPO1Q2MKA7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RSPO1Q2MKA7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 FAM8A3P-201ENST00000427218 844 ntBASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 IGHV3-42-201ENST00000520410 361 ntBASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 AC005498.2-205ENST00000593218 784 ntBASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 AC000095.1-201ENST00000603208 874 ntBASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 AC106028.4-201ENST00000614509 607 ntBASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RSPO1Q2MKA7 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 CICP24-201ENST00000605464 2705 ntBASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 AC022144.1-201ENST00000602255 1580 ntBASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.51□□□□□ -0.25
RSPO1Q2MKA7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms