Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC19.18■□□□□ 0.66
ATP2B3Q16720 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATP2B3Q16720 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 AC079776.1-201ENST00000401540 1152 ntBASIC19.17■□□□□ 0.66
ATP2B3Q16720 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 AC008735.3-201ENST00000596646 500 ntBASIC19.17■□□□□ 0.66
ATP2B3Q16720 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 STK24-203ENST00000397517 4578 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ATP2B3Q16720 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC19.17■□□□□ 0.66
ATP2B3Q16720 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 C1QBPP1-201ENST00000400117 770 ntBASIC19.16■□□□□ 0.66
ATP2B3Q16720 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 SOCS2P1-201ENST00000417727 557 ntBASIC19.16■□□□□ 0.66
ATP2B3Q16720 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 GPR53P-205ENST00000457298 1084 ntBASIC19.16■□□□□ 0.66
ATP2B3Q16720 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 HILS1-202ENST00000545329 423 ntBASIC19.16■□□□□ 0.66
ATP2B3Q16720 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 AL162274.1-201ENST00000617191 1098 ntBASIC19.16■□□□□ 0.66
ATP2B3Q16720 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
ATP2B3Q16720 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ATP2B3Q16720 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ATP2B3Q16720 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC19.15■□□□□ 0.66
ATP2B3Q16720 AC026410.3-201ENST00000514280 936 ntBASIC19.15■□□□□ 0.66
ATP2B3Q16720 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms