Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLDN20P56880 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 MIR648-201ENST00000385046 94 ntBASIC14.43□□□□□ -0.1
CLDN20P56880 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.43□□□□□ -0.1
CLDN20P56880 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.43□□□□□ -0.1
CLDN20P56880 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.43□□□□□ -0.1
CLDN20P56880 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 AL512361.1-201ENST00000554200 418 ntBASIC14.43□□□□□ -0.1
CLDN20P56880 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.43□□□□□ -0.1
CLDN20P56880 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 AL844908.2-201ENST00000609461 460 ntBASIC14.43□□□□□ -0.1
CLDN20P56880 AJ011932.1-201ENST00000621707 465 ntBASIC14.43□□□□□ -0.1
CLDN20P56880 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.43□□□□□ -0.1
CLDN20P56880 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLDN20P56880 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.43□□□□□ -0.1
CLDN20P56880 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN20P56880 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CLDN20P56880 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 MRPS18AP1-201ENST00000414458 589 ntBASIC14.42□□□□□ -0.1
CLDN20P56880 FAM8A3P-201ENST00000427218 844 ntBASIC14.42□□□□□ -0.1
CLDN20P56880 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.42□□□□□ -0.1
CLDN20P56880 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.42□□□□□ -0.1
CLDN20P56880 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLDN20P56880 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 AC112504.1-201ENST00000623415 1841 ntBASIC14.42□□□□□ -0.1
CLDN20P56880 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.42□□□□□ -0.1
CLDN20P56880 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CLDN20P56880 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.42□□□□□ -0.1
CLDN20P56880 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLDN20P56880 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN20P56880 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CLDN20P56880 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.41□□□□□ -0.1
CLDN20P56880 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CLDN20P56880 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.41□□□□□ -0.1
CLDN20P56880 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.41□□□□□ -0.1
CLDN20P56880 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms