Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RNA5SP416-201ENST00000516838 111 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 SPDYE9P-201ENST00000570642 692 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.3□□□□□ -0.12
HMGA2P52926 SPDYE10P-202ENST00000612005 668 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 SPDYE8P-202ENST00000612377 668 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGA2P52926 AL645728.2-202ENST00000641679 227 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.3□□□□□ -0.12
HMGA2P52926 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.3□□□□□ -0.12
HMGA2P52926 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMGA2P52926 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
HMGA2P52926 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
HMGA2P52926 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.29□□□□□ -0.12
HMGA2P52926 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGA2P52926 RARRES2P9-201ENST00000565168 469 ntBASIC14.29□□□□□ -0.12
HMGA2P52926 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGA2P52926 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGA2P52926 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGA2P52926 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGA2P52926 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGA2P52926 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.29□□□□□ -0.12
HMGA2P52926 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGA2P52926 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.29□□□□□ -0.12
HMGA2P52926 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.29□□□□□ -0.12
HMGA2P52926 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HMGA2P52926 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HMGA2P52926 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.28□□□□□ -0.12
HMGA2P52926 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HMGA2P52926 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.28□□□□□ -0.12
HMGA2P52926 IGHV3-62-201ENST00000520057 340 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms