Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.56□□□□□ -0.24
HCFC1P51610 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.56□□□□□ -0.24
HCFC1P51610 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC13.56□□□□□ -0.24
HCFC1P51610 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.56□□□□□ -0.24
HCFC1P51610 SCARNA20.5-201ENST00000516991 142 ntBASIC13.56□□□□□ -0.24
HCFC1P51610 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.56□□□□□ -0.24
HCFC1P51610 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HCFC1P51610 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HCFC1P51610 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.56□□□□□ -0.24
HCFC1P51610 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HCFC1P51610 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 AL138709.1-201ENST00000614840 1693 ntBASIC13.55□□□□□ -0.24
HCFC1P51610 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.55□□□□□ -0.24
HCFC1P51610 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 ACKR1-201ENST00000368121 1240 ntBASIC13.55□□□□□ -0.24
HCFC1P51610 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.55□□□□□ -0.24
HCFC1P51610 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.55□□□□□ -0.24
HCFC1P51610 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.55□□□□□ -0.24
HCFC1P51610 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.55□□□□□ -0.24
HCFC1P51610 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HCFC1P51610 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 RNA5SP423-201ENST00000517127 109 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.54□□□□□ -0.24
HCFC1P51610 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 AC106872.11-201ENST00000605838 421 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 AHCYP2-201ENST00000430630 1300 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 AC138028.6-201ENST00000616106 1482 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 AC022188.1-201ENST00000620960 1664 ntBASIC13.54□□□□□ -0.24
HCFC1P51610 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HCFC1P51610 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HCFC1P51610 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HCFC1P51610 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms