Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC19.12■□□□□ 0.65
TM4SF1P30408 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TM4SF1P30408 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC19.12■□□□□ 0.65
TM4SF1P30408 AC234782.1-201ENST00000451950 919 ntBASIC19.12■□□□□ 0.65
TM4SF1P30408 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 DUX4L47-201ENST00000566374 394 ntBASIC19.12■□□□□ 0.65
TM4SF1P30408 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.12■□□□□ 0.65
TM4SF1P30408 AP003419.4-201ENST00000616071 517 ntBASIC19.12■□□□□ 0.65
TM4SF1P30408 AL162426.1-201ENST00000624141 743 ntBASIC19.12■□□□□ 0.65
TM4SF1P30408 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TM4SF1P30408 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.12■□□□□ 0.65
TM4SF1P30408 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.12■□□□□ 0.65
TM4SF1P30408 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TM4SF1P30408 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
TM4SF1P30408 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TM4SF1P30408 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TM4SF1P30408 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 TUBB8P8-201ENST00000458717 1058 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.11■□□□□ 0.65
TM4SF1P30408 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 AC104784.1-201ENST00000473096 294 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 IQSEC3P1-201ENST00000538799 536 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 SAMD11P1-201ENST00000571429 661 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 AL353770.1-201ENST00000614915 403 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.11■□□□□ 0.65
TM4SF1P30408 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TM4SF1P30408 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 AL662844.4-201ENST00000606367 2838 ntBASIC19.11■□□□□ 0.65
TM4SF1P30408 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TM4SF1P30408 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TM4SF1P30408 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TM4SF1P30408 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 AC084364.1-201ENST00000551967 1556 ntBASIC19.1■□□□□ 0.65
TM4SF1P30408 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF1P30408 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF1P30408 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 AC106794.1-201ENST00000506935 792 ntBASIC19.1■□□□□ 0.65
TM4SF1P30408 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 AC103988.2-201ENST00000561804 725 ntBASIC19.1■□□□□ 0.65
TM4SF1P30408 SYT17-208ENST00000568433 812 ntTSL 3 BASIC19.1■□□□□ 0.65
TM4SF1P30408 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF1P30408 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.1■□□□□ 0.65
TM4SF1P30408 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TM4SF1P30408 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 NKILA-202ENST00000614771 2598 ntBASIC19.1■□□□□ 0.65
TM4SF1P30408 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC19.1■□□□□ 0.65
TM4SF1P30408 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms