Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AC092384.3-202ENST00000564646 2873 ntBASIC15.85■□□□□ 0.13
HLA-DPA1P20036 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 AC009090.5-201ENST00000624886 2285 ntBASIC15.85■□□□□ 0.13
HLA-DPA1P20036 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DPA1P20036 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AC015922.1-201ENST00000421102 1152 ntBASIC15.84■□□□□ 0.13
HLA-DPA1P20036 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AC009477.1-201ENST00000452936 217 ntBASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AC044860.1-202ENST00000559481 777 ntBASIC15.84■□□□□ 0.13
HLA-DPA1P20036 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AL161772.1-201ENST00000610494 4412 ntBASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 BTBD7P1-201ENST00000447253 1453 ntBASIC15.84■□□□□ 0.13
HLA-DPA1P20036 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DPA1P20036 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HLA-DPA1P20036 PPT1-215ENST00000641471 2368 ntBASIC15.83■□□□□ 0.12
HLA-DPA1P20036 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 LINC01115-203ENST00000606068 577 ntBASIC15.83■□□□□ 0.12
HLA-DPA1P20036 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.83■□□□□ 0.12
HLA-DPA1P20036 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.83■□□□□ 0.12
HLA-DPA1P20036 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms