Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CAPN2P17655 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CAPN2P17655 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CAPN2P17655 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.12■□□□□ 0.49
CAPN2P17655 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN2P17655 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC18.12■□□□□ 0.49
CAPN2P17655 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN2P17655 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN2P17655 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN2P17655 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CAPN2P17655 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.12■□□□□ 0.49
CAPN2P17655 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 AC020765.3-201ENST00000613051 740 ntBASIC18.12■□□□□ 0.49
CAPN2P17655 CU634019.7-201ENST00000624153 1185 ntBASIC18.12■□□□□ 0.49
CAPN2P17655 FP236241.2-201ENST00000624906 1185 ntBASIC18.12■□□□□ 0.49
CAPN2P17655 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.12■□□□□ 0.49
CAPN2P17655 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CAPN2P17655 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 AC092171.3-201ENST00000610122 2651 ntBASIC18.12■□□□□ 0.49
CAPN2P17655 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC18.12■□□□□ 0.49
CAPN2P17655 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CAPN2P17655 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
CAPN2P17655 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 MPV17-206ENST00000402722 827 ntTSL 3 BASIC18.11■□□□□ 0.49
CAPN2P17655 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 CALR4P-201ENST00000431943 946 ntBASIC18.11■□□□□ 0.49
CAPN2P17655 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.11■□□□□ 0.49
CAPN2P17655 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC18.11■□□□□ 0.49
CAPN2P17655 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.11■□□□□ 0.49
CAPN2P17655 TDH-203ENST00000531764 1110 ntBASIC18.11■□□□□ 0.49
CAPN2P17655 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 AC010328.2-201ENST00000597698 1111 ntBASIC18.11■□□□□ 0.49
CAPN2P17655 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 KRT8P39-201ENST00000396270 1433 ntBASIC18.11■□□□□ 0.49
CAPN2P17655 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CAPN2P17655 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CAPN2P17655 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CAPN2P17655 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.11■□□□□ 0.49
CAPN2P17655 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CAPN2P17655 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
CAPN2P17655 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC18.1■□□□□ 0.49
CAPN2P17655 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN2P17655 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.1■□□□□ 0.49
CAPN2P17655 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 AC093525.9-201ENST00000624961 1746 ntBASIC18.1■□□□□ 0.49
CAPN2P17655 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.1■□□□□ 0.49
CAPN2P17655 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CAPN2P17655 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms