Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MROH4P-201ENST00000431302 1578 ntBASIC15.28■□□□□ 0.04
LINGO3P0C6S8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LINGO3P0C6S8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 HSPA7-201ENST00000445535 1927 ntBASIC15.27■□□□□ 0.04
LINGO3P0C6S8 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 AC089987.1-201ENST00000551654 2209 ntBASIC15.27■□□□□ 0.04
LINGO3P0C6S8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 MIR574-201ENST00000385209 96 ntBASIC15.27■□□□□ 0.04
LINGO3P0C6S8 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 AP000347.1-202ENST00000435868 847 ntBASIC15.27■□□□□ 0.04
LINGO3P0C6S8 KRT18P3-201ENST00000451602 1288 ntBASIC15.27■□□□□ 0.04
LINGO3P0C6S8 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.27■□□□□ 0.04
LINGO3P0C6S8 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LINGO3P0C6S8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 AL513480.1-201ENST00000451731 511 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 RNA5SP416-201ENST00000516838 111 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 MIR4515-201ENST00000584082 81 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 AL671883.3-201ENST00000603274 991 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 PPT1-213ENST00000641319 2388 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 AL023775.1-201ENST00000454907 1746 ntBASIC15.26■□□□□ 0.03
LINGO3P0C6S8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
LINGO3P0C6S8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 SLC6A6P1-201ENST00000413933 1850 ntBASIC15.25■□□□□ 0.03
LINGO3P0C6S8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 AL031731.1-201ENST00000642131 2094 ntBASIC15.25■□□□□ 0.03
LINGO3P0C6S8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINGO3P0C6S8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms