Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AC105250.1-201ENST00000509378 2057 ntBASIC14.22□□□□□ -0.13
FREM3P0C091 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 AC092384.3-202ENST00000564646 2873 ntBASIC14.21□□□□□ -0.13
FREM3P0C091 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 OR8S1-201ENST00000310194 1080 ntBASIC14.21□□□□□ -0.13
FREM3P0C091 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.21□□□□□ -0.13
FREM3P0C091 MIR1909-201ENST00000411312 80 ntBASIC14.21□□□□□ -0.13
FREM3P0C091 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.21□□□□□ -0.13
FREM3P0C091 CR383656.12-201ENST00000549567 513 ntBASIC14.21□□□□□ -0.13
FREM3P0C091 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.21□□□□□ -0.13
FREM3P0C091 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.21□□□□□ -0.13
FREM3P0C091 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 SSR4P1-203ENST00000599569 2260 ntBASIC14.21□□□□□ -0.13
FREM3P0C091 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.21□□□□□ -0.13
FREM3P0C091 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
FREM3P0C091 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.21□□□□□ -0.13
FREM3P0C091 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.21□□□□□ -0.13
FREM3P0C091 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.21□□□□□ -0.13
FREM3P0C091 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.21□□□□□ -0.13
FREM3P0C091 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.21□□□□□ -0.13
FREM3P0C091 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
FREM3P0C091 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.14
FREM3P0C091 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
FREM3P0C091 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FREM3P0C091 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.21□□□□□ -0.14
FREM3P0C091 AC138969.3-201ENST00000546612 1459 ntBASIC14.21□□□□□ -0.14
FREM3P0C091 AC138932.2-201ENST00000548268 1459 ntBASIC14.21□□□□□ -0.14
FREM3P0C091 AC126755.4-201ENST00000549796 1459 ntBASIC14.21□□□□□ -0.14
FREM3P0C091 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
FREM3P0C091 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.21□□□□□ -0.14
FREM3P0C091 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.2□□□□□ -0.14
FREM3P0C091 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.2□□□□□ -0.14
FREM3P0C091 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.2□□□□□ -0.14
FREM3P0C091 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.2□□□□□ -0.14
FREM3P0C091 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.2□□□□□ -0.14
FREM3P0C091 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.2□□□□□ -0.14
FREM3P0C091 AC107373.2-201ENST00000607735 490 ntBASIC14.2□□□□□ -0.14
FREM3P0C091 MIR8072-201ENST00000614241 80 ntBASIC14.2□□□□□ -0.14
FREM3P0C091 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.2□□□□□ -0.14
FREM3P0C091 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
FREM3P0C091 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
FREM3P0C091 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
FREM3P0C091 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
FREM3P0C091 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms