Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.31□□□□□ -0.12
P04436 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
P04436 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.31□□□□□ -0.12
P04436 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.31□□□□□ -0.12
P04436 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P04436 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P04436 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
P04436 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.31□□□□□ -0.12
P04436 KRT8P22-201ENST00000562317 1415 ntBASIC14.31□□□□□ -0.12
P04436 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.31□□□□□ -0.12
P04436 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
P04436 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
P04436 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
P04436 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.3□□□□□ -0.12
P04436 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
P04436 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
P04436 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
P04436 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
P04436 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.3□□□□□ -0.12
P04436 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.3□□□□□ -0.12
P04436 SOCS2P1-201ENST00000417727 557 ntBASIC14.3□□□□□ -0.12
P04436 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.3□□□□□ -0.12
P04436 RN7SL837P-201ENST00000463010 287 ntBASIC14.3□□□□□ -0.12
P04436 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.3□□□□□ -0.12
P04436 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.3□□□□□ -0.12
P04436 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.3□□□□□ -0.12
P04436 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.3□□□□□ -0.12
P04436 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 AC132938.2-201ENST00000579188 680 ntBASIC14.3□□□□□ -0.12
P04436 AC015910.1-201ENST00000579400 975 ntBASIC14.3□□□□□ -0.12
P04436 BRI3BPP1-201ENST00000594224 787 ntBASIC14.3□□□□□ -0.12
P04436 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.3□□□□□ -0.12
P04436 AC000095.1-201ENST00000603208 874 ntBASIC14.3□□□□□ -0.12
P04436 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.3□□□□□ -0.12
P04436 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.3□□□□□ -0.12
P04436 AL591163.1-201ENST00000641757 987 ntBASIC14.3□□□□□ -0.12
P04436 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
P04436 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 INTS4P2-202ENST00000614726 2019 ntBASIC14.3□□□□□ -0.12
P04436 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.3□□□□□ -0.12
P04436 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
P04436 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.3□□□□□ -0.12
P04436 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
P04436 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.29□□□□□ -0.12
P04436 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.29□□□□□ -0.12
P04436 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.29□□□□□ -0.12
P04436 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
P04436 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.29□□□□□ -0.12
P04436 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.29□□□□□ -0.12
P04436 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.29□□□□□ -0.12
P04436 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04436 TTTY23B-201ENST00000442790 549 ntBASIC14.29□□□□□ -0.12
P04436 AC007389.4-201ENST00000454674 793 ntBASIC14.29□□□□□ -0.12
P04436 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms