Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 AC105339.1-204ENST00000636249 355 ntBASIC13.2□□□□□ -0.3
GAPDHP04406 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
GAPDHP04406 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
GAPDHP04406 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.2□□□□□ -0.3
GAPDHP04406 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
GAPDHP04406 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 AL161772.1-201ENST00000610494 4412 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
GAPDHP04406 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 MIR346-201ENST00000362234 95 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 AC211486.1-202ENST00000416371 468 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.19□□□□□ -0.3
GAPDHP04406 AC245100.5-201ENST00000452108 331 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.19□□□□□ -0.3
GAPDHP04406 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 AC211476.1-201ENST00000503899 468 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
GAPDHP04406 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 AP000842.3-202ENST00000569238 1080 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.19□□□□□ -0.3
GAPDHP04406 MIR4321-201ENST00000592276 80 ntBASIC13.19□□□□□ -0.3
GAPDHP04406 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
GAPDHP04406 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
GAPDHP04406 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
GAPDHP04406 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.18□□□□□ -0.3
GAPDHP04406 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
GAPDHP04406 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.18□□□□□ -0.3
GAPDHP04406 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms