Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.62■□□□□ 0.41
ALDH1A1P00352 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ALDH1A1P00352 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 AL158070.2-201ENST00000623713 1621 ntBASIC17.61■□□□□ 0.41
ALDH1A1P00352 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 CROCCP1-201ENST00000426910 5675 ntBASIC17.61■□□□□ 0.41
ALDH1A1P00352 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
ALDH1A1P00352 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ALDH1A1P00352 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 GHSR-202ENST00000427970 912 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 RPL7P35-201ENST00000446943 740 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 AC132192.2-201ENST00000596206 1147 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 AC087045.2-201ENST00000606279 1003 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 AC092171.5-201ENST00000608012 942 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 WT1-AS_6.1-201ENST00000614919 121 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 AL162426.1-201ENST00000624141 743 ntBASIC17.6■□□□□ 0.41
ALDH1A1P00352 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ALDH1A1P00352 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ALDH1A1P00352 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC078925.2-201ENST00000624013 1973 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 NOC2LP2-201ENST00000407594 1944 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC078991.1-201ENST00000437297 610 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 FAM58BP-201ENST00000439056 645 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 RPL18P13-201ENST00000478088 569 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC100827.2-201ENST00000563214 1194 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 MIR4754-201ENST00000582477 89 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC103810.10-201ENST00000606504 343 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC138466.3-201ENST00000619983 221 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 AC051619.9-201ENST00000623237 597 ntBASIC17.59■□□□□ 0.41
ALDH1A1P00352 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ALDH1A1P00352 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ALDH1A1P00352 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms