Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.31□□□□□ -0.44
ZNF253O75346 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ZNF253O75346 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ZNF253O75346 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
ZNF253O75346 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF253O75346 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF253O75346 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 TCAP-202ENST00000578283 583 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF253O75346 AL121912.1-201ENST00000603683 238 ntBASIC12.3□□□□□ -0.44
ZNF253O75346 AL009183.1-201ENST00000603760 355 ntBASIC12.3□□□□□ -0.44
ZNF253O75346 AL078644.1-201ENST00000609881 752 ntBASIC12.3□□□□□ -0.44
ZNF253O75346 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 LINC00552-201ENST00000625151 2579 ntBASIC12.3□□□□□ -0.44
ZNF253O75346 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
ZNF253O75346 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.3□□□□□ -0.44
ZNF253O75346 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ZNF253O75346 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ZNF253O75346 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
ZNF253O75346 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms