Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CTNSO60931 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CTNSO60931 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTNSO60931 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTNSO60931 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CTNSO60931 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CTNSO60931 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CTNSO60931 AC090616.6-203ENST00000579186 1945 ntBASIC14.68□□□□□ -0.06
CTNSO60931 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CTNSO60931 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.68□□□□□ -0.06
CTNSO60931 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 RN7SL399P-201ENST00000471648 279 ntBASIC14.68□□□□□ -0.06
CTNSO60931 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.68□□□□□ -0.06
CTNSO60931 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.68□□□□□ -0.06
CTNSO60931 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 AC036164.1-201ENST00000570544 333 ntBASIC14.68□□□□□ -0.06
CTNSO60931 AC138761.1-201ENST00000584393 385 ntBASIC14.68□□□□□ -0.06
CTNSO60931 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 AL132655.2-201ENST00000596276 594 ntBASIC14.68□□□□□ -0.06
CTNSO60931 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CTNSO60931 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CTNSO60931 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 AC104640.1-201ENST00000562617 2109 ntBASIC14.68□□□□□ -0.06
CTNSO60931 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CTNSO60931 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.67□□□□□ -0.06
CTNSO60931 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CTNSO60931 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.67□□□□□ -0.06
CTNSO60931 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CTNSO60931 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CTNSO60931 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTNSO60931 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms