Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CACNG3O60359 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CACNG3O60359 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CACNG3O60359 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CACNG3O60359 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CACNG3O60359 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CACNG3O60359 AP003680.1-201ENST00000598970 3660 ntBASIC16.06■□□□□ 0.16
CACNG3O60359 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CACNG3O60359 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.06■□□□□ 0.16
CACNG3O60359 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.06■□□□□ 0.16
CACNG3O60359 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 AC018665.1-201ENST00000622927 1362 ntBASIC16.06■□□□□ 0.16
CACNG3O60359 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 AL133267.1-201ENST00000398220 340 ntBASIC16.06■□□□□ 0.16
CACNG3O60359 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.06■□□□□ 0.16
CACNG3O60359 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.06■□□□□ 0.16
CACNG3O60359 AC119751.2-201ENST00000504529 210 ntBASIC16.06■□□□□ 0.16
CACNG3O60359 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 SLC25A47P1-201ENST00000531577 414 ntBASIC16.06■□□□□ 0.16
CACNG3O60359 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.06■□□□□ 0.16
CACNG3O60359 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.06■□□□□ 0.16
CACNG3O60359 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.06■□□□□ 0.16
CACNG3O60359 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.06■□□□□ 0.16
CACNG3O60359 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.06■□□□□ 0.16
CACNG3O60359 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CACNG3O60359 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CACNG3O60359 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 AL139384.1-201ENST00000612143 3047 ntBASIC16.05■□□□□ 0.16
CACNG3O60359 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CACNG3O60359 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.05■□□□□ 0.16
CACNG3O60359 CROCCP4-201ENST00000457096 498 ntBASIC16.05■□□□□ 0.16
CACNG3O60359 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 TDH-203ENST00000531764 1110 ntBASIC16.05■□□□□ 0.16
CACNG3O60359 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.05■□□□□ 0.16
CACNG3O60359 AP005482.1-201ENST00000563722 1273 ntBASIC16.05■□□□□ 0.16
CACNG3O60359 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CACNG3O60359 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.05■□□□□ 0.16
CACNG3O60359 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 AC073347.1-201ENST00000421633 2643 ntBASIC16.05■□□□□ 0.16
CACNG3O60359 AC087481.3-201ENST00000602886 1894 ntBASIC16.05■□□□□ 0.16
CACNG3O60359 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.05■□□□□ 0.16
CACNG3O60359 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CACNG3O60359 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CACNG3O60359 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms