Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRAF3IP2O43734 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AC112693.3-201ENST00000624819 1983 ntBASIC13.98□□□□□ -0.17
TRAF3IP2O43734 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AC114501.2-201ENST00000439631 535 ntBASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 CYMP-203ENST00000474680 1263 ntBASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AF228730.6-201ENST00000641497 218 ntBASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AC084121.3-201ENST00000641716 218 ntBASIC13.98□□□□□ -0.17
TRAF3IP2O43734 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.98□□□□□ -0.17
TRAF3IP2O43734 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.97□□□□□ -0.17
TRAF3IP2O43734 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms