Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 RPS8P6-201ENST00000426177 609 ntBASIC15□□□□□ -0.01
CLOCKO15516 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15□□□□□ -0.01
CLOCKO15516 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15□□□□□ -0.01
CLOCKO15516 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15□□□□□ -0.01
CLOCKO15516 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15□□□□□ -0.01
CLOCKO15516 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CLOCKO15516 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CLOCKO15516 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CLOCKO15516 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CLOCKO15516 KRT8P44-201ENST00000441609 1350 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CLOCKO15516 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.99□□□□□ -0.01
CLOCKO15516 MRPL20P1-201ENST00000400819 433 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 GPX1P2-201ENST00000429271 606 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 AC093724.1-201ENST00000448659 1027 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.99□□□□□ -0.01
CLOCKO15516 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.99□□□□□ -0.01
CLOCKO15516 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.99□□□□□ -0.01
CLOCKO15516 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.99□□□□□ -0.01
CLOCKO15516 AL365330.1-201ENST00000607459 531 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 AC004790.2-201ENST00000623588 572 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.99□□□□□ -0.01
CLOCKO15516 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CLOCKO15516 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CLOCKO15516 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CLOCKO15516 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.98□□□□□ -0.01
CLOCKO15516 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.98□□□□□ -0.01
CLOCKO15516 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLOCKO15516 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CLOCKO15516 AC126365.1-201ENST00000578585 1514 ntBASIC14.98□□□□□ -0.01
CLOCKO15516 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLOCKO15516 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 524.6 ms