Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 KRT18P64-201ENST00000434946 1219 ntBASIC15.4■□□□□ 0.06
CDC7O00311 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.4■□□□□ 0.06
CDC7O00311 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.4■□□□□ 0.06
CDC7O00311 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.4■□□□□ 0.06
CDC7O00311 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.4■□□□□ 0.06
CDC7O00311 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.4■□□□□ 0.06
CDC7O00311 MIR6069-201ENST00000620069 79 ntBASIC15.4■□□□□ 0.06
CDC7O00311 AL033527.5-202ENST00000641632 1098 ntBASIC15.4■□□□□ 0.06
CDC7O00311 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDC7O00311 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDC7O00311 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
CDC7O00311 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDC7O00311 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.39■□□□□ 0.05
CDC7O00311 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.39■□□□□ 0.05
CDC7O00311 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.39■□□□□ 0.05
CDC7O00311 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
CDC7O00311 AC004449.1-201ENST00000564240 433 ntBASIC15.39■□□□□ 0.05
CDC7O00311 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.39■□□□□ 0.05
CDC7O00311 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 AL138828.2-201ENST00000615812 383 ntBASIC15.39■□□□□ 0.05
CDC7O00311 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CDC7O00311 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 TUBB3P1-201ENST00000405796 1332 ntBASIC15.39■□□□□ 0.05
CDC7O00311 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.39■□□□□ 0.05
CDC7O00311 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDC7O00311 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.38■□□□□ 0.05
CDC7O00311 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 FO538757.1-201ENST00000623083 1397 ntBASIC15.38■□□□□ 0.05
CDC7O00311 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDC7O00311 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDC7O00311 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms